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Table 7 Relationships between different DNMT1 and DNMT3B genotypes and PANSS scores in schizophrenia group

From: DNMT1 SNPs (rs2114724 and rs2228611) associated with positive symptoms in Chinese patients with schizophrenia

SNP

rs2114724

rs2228611

rs1569686

rs2424908

rs2424932

rs6119954

Genotype (n)

CC (57)

CT (57)

TT (20)

CC (57)

CT (57)

TT (20)

GG (3)

GT (9)

TT (122)

CC (23)

CT (59)

TT (52)

AG (12)

GG (122)

AA (8)

AG (56)

GG (70)

P1 (delusions)

X2 (P)

6.201 (0.045)

6.201 (0.045)

3.054 (0.217)

2.183 (0.336)

1.078 (0.281)

1.664 (0.435)

P2 (conceptual disorganization)

X2 (P)

0.715 (0.699)

0.715 (0.699)

0.158 (0.924)

0.542 (0.763)

0.044 (0.965)

1.555 (0.460)

P3 (hallucinatory behavior)

X2 (P)

7.851 (0.020)

7.851 (0.020)

5.685 (0.058)

0.052 (0.975)

1.878 (0.060)

0.020 (0.990)

P4 (excitement)

X2 (P)

0.300 (0.861)

0.300 (0.861)

0.888 (0.641)

4.028 (0.133)

0.894 (0.371)

3.662 (0.160)

P5 (grandiosity)

X2 (P)

1.264 (0.532)

1.264 (0.532)

0.918 (0.632)

0.219 (0.896)

0.315 (0.753)

5.937 (0.051)

P6 (suspiciousness/persecution)

X2 (P)

10.387 (0.006)

10.387 (0.006)

2.659 (0.265)

0.209 (0.901)

1.292 (0.196)

0.431 (0.806)

P7 (hostility)

X2 (P)

1.954 (0.376)

1.954 (0.376)

2.142 (0.343)

1.062 (0.588)

0.203 (0.839)

1.474 (0.478)

Total of positive symptoms

X2 (P)

8.471 (0.014)

8.471 (0.014)

1.995 (0.369)

0.310 (0.856)

0.967 (0.334)

0.610 (0.737)

N1 (blunted affect)

X2 (P)

0.877 (0.645)

0.877 (0.645)

1.579 (0.454)

2.963 (0.227)

0.723 (0.470)

2.963 (0.227)

N2 (emotional withdrawal)

X2 (P)

2.692 (0.260)

2.692 (0.260)

2.830 (0.243)

3.709 (0.157)

0.208 (0.837)

2.899 (0.235)

N3 (poor rapport)

X2 (P)

1.376 (0.502)

1.376 (0.502)

0.863 (0.649)

1.382 (0.501)

0.790 (0.430)

1.337 (0.512)

N4 (passive/apathetic social withdrawal)

X2 (P)

1.886 (0.389)

1.886 (0.389)

3.987 (0.136)

1.640 (0.440)

0.487 (0.627)

0.085 (0.958)

N5 (difficulty in abstract thinking)

X2 (P)

1.329 (0.515)

1.329 (0.515)

0.736 (0.692)

2.147 (0.342)

0.520 (0.603)

1.537 (0.464)

N6 (lack of spontaneity and flow of conversation)

X2 (P)

0.720 (0.698)

0.720 (0.698)

0.019 (0.990)

0.500 (0.779)

0.138 (0.890)

0.037 (0.982)

N7 (stereotyped thinking)

X2 (P)

4.471 (0.107)

4.471 (0.107)

3.009 (0.222)

0.607 (0.738)

0.554 (0.580)

2.333 (0.311)

Total of negative symptoms

X2 (P)

2.359 (0.307)

2.359 (0.307)

1.404 (0.496)

2.412 (0.299)

0.077 (0.938)

2.287 (0.319)

G1 (somatic concern)

X2 (P)

1.253 (0.534)

1.253 (0.534)

3.377 (0.185)

3.283 (0.194)

0.331 (0.740)

7.148 (0.028)

G2 (anxiety)

X2 (P)

5.256 (0.072)

5.256 (0.072)

1.602 (0.449)

1.266 (0.531)

0.662 (0.508)

0.155 (0.925)

G3 (guilt feeling)

X2 (P)

5.584 (0.061)

5.584 (0.061)

1.275 (0.529)

0.008 (0.996)

0.626 (0.531)

2.286 (0.319)

G4 (tension)

X2 (P)

2.819 (0.244)

2.819 (0.244)

2.708 (0.258)

0.810 (0.667)

0.184 (0.854)

0.004 (0.998)

G5 (mannerisms and posturing)

X2 (P)

0.300 (0.861)

0.300 (0.861)

0.539 (0.764)

1.022 (0.600)

0.583 (0.560)

6.077 (0.048)

G6 (depression)

X2 (P)

4.176 (0.124)

4.176 (0.124)

0.276 (0.871)

1.539 (0.463)

0.217 (0.828)

1.688 (0.430)

G7 (motor retardation)

X2 (P)

6.656 (0.036)

6.656 (0.036)

1.690 (0.430)

0.307 (0.857)

0.276 (0.782)

1.384 (0.500)

G8 (uncooperativeness)

X2 (P)

3.692 (0.158)

3.692 (0.158)

1.840 (0.399)

0.127 (0.938)

0.068 (0.946)

6.923 (0.031)

G9 (unusual thought content)

X2 (P)

5.050 (0.080)

5.050 (0.080)

0.839 (0.657)

1.691 (0.429)

0.283 (0.777)

1.464 (0.481)

G10 (disorientation)

X2 (P)

0.371 (0.831)

0.371 (0.831)

2.825 (0.243)

6.927 (0.031)

0.433 (0.665)

3.325 (0.190)

G11 (poor attention)

X2 (P)

6.003 (0.050)

6.003 (0.050)

2.197 (0.333)

0.232 (0.890)

0.222 (0.825)

1.853 (0.396)

G12 (lack of judgment and insight)

X2 (P)

2.399 (0.301)

2.399 (0.301)

2.151 (0.341)

1.135 (0.567)

0.463 (0.643)

3.279 (0.194)

G13 (disturbance of volition)

X2 (P)

3.959 (0.138)

3.959 (0.138)

5.174 (0.075)

1.434 (0.488)

0.634 (0.526)

0.117 (0.943)

G14 (poor impulse control)

X2 (P)

1.365 (0.505)

1.365 (0.505)

0.354 (0.838)

3.256 (0.196)

0.036 (0.971)

0.210 (0.900)

G15 (preoccupation)

X2 (P)

10.222 (0.006)

10.222 (0.006)

1.372 (0.504)

0.236 (0.888)

1.065 (0.287)

0.649 (0.723)

G16 (active social avoidance)

X2 (P)

1.724 (0.422)

1.724 (0.422)

1.199 (0.549)

1.340 (0.512)

0.420 (0.675)

1.087 (0.581)

Total of general symptom

X2 (P)

5.710 (0.058)

5.710 (0.058)

1.283 (0.527)

0.027 (0.986)

0.191 (0.849)

1.415 (0.493)

Positive symptoms

X2 (P)

7.938 (0.019)

7.938 (0.019)

2.579 (0.275)

2.389 (0.303)

1.245 (0.213)

1.617 (0.446)

Negative symptoms

X2 (P)

1.493 (0.474)

1.493 (0.474)

1.924 (0.382)

3.379 (0.185)

0.066 (0.948)

1.888 (0.389)

Cognitive impairment

X2 (P)

0.951 (0.621)

0.951 (0.621)

0.525 (0.769)

0.959 (0.619)

0.180 (0.857)

2.162 (0.339)

Excited/hostile

X2 (P)

2.261 (0.322)

2.261 (0.322)

0.937 (0.626)

1.646 (0.439)

0.525 (0.600)

3.353 (0.187)

Anxiety/depression

X2 (P)

4.999 (0.082)

4.999 (0.082)

0.779 (0.677)

1.293 (0.524)

0.303 (0.762)

0.891 (0.640)

PANSS (total)

X2 (P)

5.368 (0.068)

5.368 (0.068)

0.683 (0.711)

0.953 (0.621)

0.030 (0.976)

2.158 (0.340)

  1. The bold values mean the positive association between loci frequence of specific SNP with the type of clinical symptoms